This is the complete list of members for SaLSA, including all inherited members.
A_rhoNonES | FluidSolver | |
accumExtraForces(IonicGradient *forces, const ScalarFieldTilde &A_nCavityTilde) const | PCM | protected |
Adiel | PCM | protected |
atomicNumbers | PCM | protected |
atpos (defined in FluidSolver) | FluidSolver | |
bulkPotential() (defined in FluidSolver) | FluidSolver | inlinevirtual |
chi(const ScalarFieldTilde &) const | SaLSA | |
coulomb(const ScalarFieldTilde &rho) (defined in PCM) | PCM | inlineprotectedstatic |
dumpDebug(const char *filenamePattern) const | PCM | virtual |
dumpDensities(const char *filenamePattern) const | SaLSA | virtual |
e (defined in FluidSolver) | FluidSolver | |
epsBulk (defined in FluidSolver) | FluidSolver | |
epsInf | FluidSolver | |
FluidSolver(const Everything &e, const FluidSolverParams &fsp) | FluidSolver | |
fsp (defined in FluidSolver) | FluidSolver | |
get_Adiel_and_grad(ScalarFieldTilde *Adiel_rhoExplicitTilde=0, ScalarFieldTilde *Adiel_nCavityTilde=0, IonicGradient *extraForces=0) const | FluidSolver | |
get_Adiel_and_grad_internal(ScalarFieldTilde &grad_rhoExplicitTilde, ScalarFieldTilde &grad_nCavityTilde, IonicGradient *extraForces) const | SaLSA | protectedvirtual |
getFullCore() const | PCM | protected |
gInfo (defined in FluidSolver) | FluidSolver | |
hessian(const ScalarFieldTilde &) const | SaLSA | virtual |
ionWidthMuCorrection() const | FluidSolver | |
k2factor | FluidSolver | |
loadState(const char *filename) | SaLSA | virtual |
minimizeFluid() | SaLSA | virtual |
nCavity (defined in PCM) | PCM | protected |
nCavityEx | PCM | protected |
PCM(const Everything &e, const FluidSolverParams &fsp) (defined in PCM) | PCM | |
precondition(const ScalarFieldTilde &) const | SaLSA | virtual |
prefersGummel() const | SaLSA | inlinevirtual |
printDebug(FILE *fp) const | PCM | inlineprotectedvirtual |
propagateCavityGradients(const ScalarFieldArray &A_shape, ScalarField &A_nCavity, ScalarFieldTilde &A_rhoExplicitTilde, IonicGradient *forces) const | PCM | protected |
rhoExplicitTilde | PCM | protected |
SaLSA(const Everything &e, const FluidSolverParams &fsp) | SaLSA | |
saveState(const char *filename) const | SaLSA | virtual |
set(const ScalarFieldTilde &rhoExplicitTilde, const ScalarFieldTilde &nCavityTilde) | FluidSolver | |
set_internal(const ScalarFieldTilde &rhoExplicitTilde, const ScalarFieldTilde &nCavityTilde) | SaLSA | protectedvirtual |
Sf | PCM | protected |
shape | PCM | protected |
shapeVdw | PCM | protected |
solve(const ScalarFieldTilde &rhs, const MinimizeParams ¶ms) | LinearSolvable< ScalarFieldTilde > | |
state | LinearSolvable< ScalarFieldTilde > | |
sync(double x) const | SaLSA | virtual |
tauCavity (defined in PCM) | PCM | protected |
updateCavity() | PCM | protected |
useGummel() const (defined in FluidSolver) | FluidSolver | inline |
~FluidSolver() (defined in FluidSolver) | FluidSolver | inlinevirtual |
~PCM() (defined in PCM) | PCM | virtual |
~SaLSA() (defined in SaLSA) | SaLSA | virtual |