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SaLSA Member List

This is the complete list of members for SaLSA, including all inherited members.

A_rhoNonESFluidSolver
accumExtraForces(IonicGradient *forces, const ScalarFieldTilde &A_nCavityTilde) const PCMprotected
AdielPCMprotected
atomicNumbersPCMprotected
atpos (defined in FluidSolver)FluidSolver
bulkPotential() (defined in FluidSolver)FluidSolverinlinevirtual
chi(const ScalarFieldTilde &) const SaLSA
coulomb(const ScalarFieldTilde &rho) (defined in PCM)PCMinlineprotectedstatic
dumpDebug(const char *filenamePattern) const PCMvirtual
dumpDensities(const char *filenamePattern) const SaLSAvirtual
e (defined in FluidSolver)FluidSolver
epsBulk (defined in FluidSolver)FluidSolver
epsInfFluidSolver
FluidSolver(const Everything &e, const FluidSolverParams &fsp)FluidSolver
fsp (defined in FluidSolver)FluidSolver
get_Adiel_and_grad(ScalarFieldTilde *Adiel_rhoExplicitTilde=0, ScalarFieldTilde *Adiel_nCavityTilde=0, IonicGradient *extraForces=0) const FluidSolver
get_Adiel_and_grad_internal(ScalarFieldTilde &grad_rhoExplicitTilde, ScalarFieldTilde &grad_nCavityTilde, IonicGradient *extraForces) const SaLSAprotectedvirtual
getFullCore() const PCMprotected
gInfo (defined in FluidSolver)FluidSolver
hessian(const ScalarFieldTilde &) const SaLSAvirtual
ionWidthMuCorrection() const FluidSolver
k2factorFluidSolver
loadState(const char *filename)SaLSAvirtual
minimizeFluid()SaLSAvirtual
nCavity (defined in PCM)PCMprotected
nCavityExPCMprotected
PCM(const Everything &e, const FluidSolverParams &fsp) (defined in PCM)PCM
precondition(const ScalarFieldTilde &) const SaLSAvirtual
prefersGummel() const SaLSAinlinevirtual
printDebug(FILE *fp) const PCMinlineprotectedvirtual
propagateCavityGradients(const ScalarFieldArray &A_shape, ScalarField &A_nCavity, ScalarFieldTilde &A_rhoExplicitTilde, IonicGradient *forces) const PCMprotected
rhoExplicitTildePCMprotected
SaLSA(const Everything &e, const FluidSolverParams &fsp)SaLSA
saveState(const char *filename) const SaLSAvirtual
set(const ScalarFieldTilde &rhoExplicitTilde, const ScalarFieldTilde &nCavityTilde)FluidSolver
set_internal(const ScalarFieldTilde &rhoExplicitTilde, const ScalarFieldTilde &nCavityTilde)SaLSAprotectedvirtual
SfPCMprotected
shapePCMprotected
shapeVdwPCMprotected
solve(const ScalarFieldTilde &rhs, const MinimizeParams &params)LinearSolvable< ScalarFieldTilde >
stateLinearSolvable< ScalarFieldTilde >
sync(double x) const SaLSAvirtual
tauCavity (defined in PCM)PCMprotected
updateCavity()PCMprotected
useGummel() const (defined in FluidSolver)FluidSolverinline
~FluidSolver() (defined in FluidSolver)FluidSolverinlinevirtual
~PCM() (defined in PCM)PCMvirtual
~SaLSA() (defined in SaLSA)SaLSAvirtual