Public Member Functions | |
Site (string name, int atomicNumber=0) | |
void | setup (const GridInfo &gInfo) |
initialize the radial functions from the properties specified above | |
operator bool () const | |
return whether site has been setup | |
Public Attributes | |
string | name |
site name | |
double | Rhs |
hard sphere radius | |
int | atomicNumber |
necessary for vdW parameters | |
double | Znuc |
double | sigmaNuc |
magnitude of the nuclear charge (positive) and corresponding gaussian width | |
double | Zelec |
double | aElec |
magnitude of electron charge (positive) and corresponding cuspless-exponential width | |
double | Zsite |
site charge in electrons | |
double | deltaS |
G=0 correction potential due to electron-fluid and fluid-fluid charge kernel mismatch. | |
double | sigmaElec |
double | rcElec |
width and location of peak in electron charge distribution | |
string | elecFilename |
string | elecFilenameG |
include electron charge density from real- or G- space radial ASCII file | |
double | alpha |
double | aPol |
isotropic polarizability and corresponding cuspless-exponential width | |
std::vector< vector3<> > | positions |
Positions w.r.t molecular origin in the reference orientation. | |
RadialFunctionG | w0 |
RadialFunctionG | w1 |
RadialFunctionG | w2 |
RadialFunctionG | w3 |
RadialFunctionG | w1v |
RadialFunctionG | w2m |
Hard sphere weight functions. | |
RadialFunctionG | elecKernel |
RadialFunctionG | chargeKernel |
RadialFunctionG | polKernel |
Electron density, net charge density and polarizability kernels for the sites. | |